Statistical Methods For Annotation Analysis
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Statistical Methods for Annotation Analysis
Author: Silviu Paun
language: en
Publisher: Morgan & Claypool Publishers
Release Date: 2022-01-13
Labelling data is one of the most fundamental activities in science, and has underpinned practice, particularly in medicine, for decades, as well as research in corpus linguistics since at least the development of the Brown corpus. With the shift towards Machine Learning in Artificial Intelligence (AI), the creation of datasets to be used for training and evaluating AI systems, also known in AI as corpora, has become a central activity in the field as well. Early AI datasets were created on an ad-hoc basis to tackle specific problems. As larger and more reusable datasets were created, requiring greater investment, the need for a more systematic approach to dataset creation arose to ensure increased quality. A range of statistical methods were adopted, often but not exclusively from the medical sciences, to ensure that the labels used were not subjective, or to choose among different labels provided by the coders. A wide variety of such methods is now in regular use. This book is meant to provide a survey of the most widely used among these statistical methods supporting annotation practice. As far as the authors know, this is the first book attempting to cover the two families of methods in wider use. The first family of methods is concerned with the development of labelling schemes and, in particular, ensuring that such schemes are such that sufficient agreement can be observed among the coders. The second family includes methods developed to analyze the output of coders once the scheme has been agreed upon, particularly although not exclusively to identify the most likely label for an item among those provided by the coders. The focus of this book is primarily on Natural Language Processing, the area of AI devoted to the development of models of language interpretation and production, but many if not most of the methods discussed here are also applicable to other areas of AI, or indeed, to other areas of Data Science.
Statistical Methods for Annotation Analysis
Labelling data is one of the most fundamental activities in science, and has underpinned practice, particularly in medicine, for decades, as well as research in corpus linguistics since at least the development of the Brown corpus. With the shift towards Machine Learning in Artificial Intelligence (AI), the creation of datasets to be used for training and evaluating AI systems, also known in AI as corpora, has become a central activity in the field as well. Early AI datasets were created on an ad-hoc basis to tackle specific problems. As larger and more reusable datasets were created, requiring greater investment, the need for a more systematic approach to dataset creation arose to ensure increased quality. A range of statistical methods were adopted, often but not exclusively from the medical sciences, to ensure that the labels used were not subjective, or to choose among different labels provided by the coders. A wide variety of such methods is now in regular use. This book is meantto provide a survey of the most widely used among these statistical methods supporting annotation practice. As far as the authors know, this is the first book attempting to cover the two families of methods in wider use. The first family of methods is concerned with the development of labelling schemes and, in particular, ensuring that such schemes are such that sufficient agreement can be observed among the coders. The second family includes methods developed to analyze the output of coders once the scheme has been agreed upon, particularly although not exclusively to identify the most likely label for an item among those provided by the coders. The focus of this book is primarily on Natural Language Processing, the area of AI devoted to the development of models of language interpretation and production, but many if not most of the methods discussed here are also applicable to other areas of AI, or indeed, to other areas of Data Science.
Handbook of Statistical Genomics
Author: David J. Balding
language: en
Publisher: John Wiley & Sons
Release Date: 2019-07-09
A timely update of a highly popular handbook on statistical genomics This new, two-volume edition of a classic text provides a thorough introduction to statistical genomics, a vital resource for advanced graduate students, early-career researchers and new entrants to the field. It introduces new and updated information on developments that have occurred since the 3rd edition. Widely regarded as the reference work in the field, it features new chapters focusing on statistical aspects of data generated by new sequencing technologies, including sequence-based functional assays. It expands on previous coverage of the many processes between genotype and phenotype, including gene expression and epigenetics, as well as metabolomics. It also examines population genetics and evolutionary models and inference, with new chapters on the multi-species coalescent, admixture and ancient DNA, as well as genetic association studies including causal analyses and variant interpretation. The Handbook of Statistical Genomics focuses on explaining the main ideas, analysis methods and algorithms, citing key recent and historic literature for further details and references. It also includes a glossary of terms, acronyms and abbreviations, and features extensive cross-referencing between chapters, tying the different areas together. With heavy use of up-to-date examples and references to web-based resources, this continues to be a must-have reference in a vital area of research. Provides much-needed, timely coverage of new developments in this expanding area of study Numerous, brand new chapters, for example covering bacterial genomics, microbiome and metagenomics Detailed coverage of application areas, with chapters on plant breeding, conservation and forensic genetics Extensive coverage of human genetic epidemiology, including ethical aspects Edited by one of the leading experts in the field along with rising stars as his co-editors Chapter authors are world-renowned experts in the field, and newly emerging leaders. The Handbook of Statistical Genomics is an excellent introductory text for advanced graduate students and early-career researchers involved in statistical genetics.