Graph Theory And Combinatorial Biology

Graph Theory and Combinatorial Biology

Applications of Combinatorics and Graph Theory to the Biological and Social Sciences

This IMA Volume in Mathematics and its Applications Applications of Combinatorics and Graph Theory to the Biological and Social Sciences is based on the proceedings of a workshop which was an integral part of the 1987-88 IMA program on APPLIED COMBINATORICS. We are grateful to the Scientific Committee: Victor Klee (Chairman), Daniel Kleitman, Dijen Ray-Chaudhuri and Dennis Stanton for planning and implementing an exciting and stimulating year long program. We especially thank the Workshop Organizers, Joel Cohen and Fred Roberts, for organizing a workshop which brought together many of the major figures in a variety of research fields connected with the application of combinatorial ideas to the social and biological sciences. A vner Friedman Willard Miller APPLICATIONS OF COMBINATORICS AND GRAPH THEORY TO THE BIOLOGICAL AND SOCIAL SCIENCES: SEVEN FUNDAMENTAL IDEAS FRED S. RoBERTS* Abstract. To set the stage for the other papers in this volume, seven fundamental concepts which arise in the applications of combinatorics and graph theory in the biological and social sciences are described. These ideas are: RNA chains as "words" in a 4 letter alphabet; interval graphs; competition graphs or niche overlap graphs; qualitative stability; balanced signed graphs; social welfare functions; and semiorders. For each idea, some basic results are presented, some recent results are given, and some open problems are mentioned.

Combinatorics and Graph Theory

There are certain rules that one must abide by in order to create a successful sequel. — Randy Meeks, from the trailer to Scream 2 While we may not follow the precise rules that Mr. Meeks had in mind for s- cessful sequels, we have made a number of changes to the text in this second edition. In the new edition, we continue to introduce new topics with concrete - amples, we provide complete proofs of almost every result, and we preserve the book’sfriendlystyle andlivelypresentation,interspersingthetextwith occasional jokes and quotations. The rst two chapters, on graph theory and combinatorics, remain largely independent, and may be covered in either order. Chapter 3, on in nite combinatorics and graphs, may also be studied independently, although many readers will want to investigate trees, matchings, and Ramsey theory for nite sets before exploring these topics for in nite sets in the third chapter. Like the rst edition, this text is aimed at upper-division undergraduate students in mathematics, though others will nd much of interest as well. It assumes only familiarity with basic proof techniques, and some experience with matrices and in nite series. The second edition offersmany additionaltopics for use in the classroom or for independentstudy. Chapter 1 includesa new sectioncoveringdistance andrelated notions in graphs, following an expanded introductory section. This new section also introduces the adjacency matrix of a graph, and describes its connection to important features of the graph.