Formal Modeling Actors Open Systems Biological Systems

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Formal Modeling: Actors; Open Systems, Biological Systems

This Festschrift volume, published in honor of Carolyn Talcott on the occasion of her 70th birthday, contains a collection of papers presented at a symposium held in Menlo Park, California, USA, in November 2011. Carolyn Talcott is a leading researcher and mentor of international renown among computer scientists. She has made key contributions to a number of areas of computer science including: semantics and verification of progamming languages; foundations of actor-based systems; middleware, meta-architectures, and systems; Maude and rewriting logic; and computational biology. The 21 papers presented are organized in topical sections named: Essays on Carolyn Talcott; actors and programming languages; cyberphysical systems; middleware and meta-architectures; formal methods and reasoning tools; and computational biology.
Formal Methods for Industrial Critical Systems

Author: Maurice H. ter Beek
language: en
Publisher: Springer Nature
Release Date: 2020-08-28
This book constitutes the proceedings of the 25th International Workshop on Formal Methods for Industrial Critical Systems, FMICS 2020, which was held during September 2-3, 2020. The conference was planned to take place in Vienna, Austria. Due to the COVID-19 pandemic it changed to a virtual event. The 11 full papers presented in this volume were carefully reviewed and selected from 26 submissions. The papers are organized in topical sections as follows: Quantitative Analysis and Cyber-Physical Systems, Formal Verification of Industrial Systems, Temporal Logic and Model Checking. The book also contains a lengthy report on a Formal Methods Survey conducted on occasion of the 25th edition of the conference.
Systems Biology Modelling and Analysis

Author: Elisabetta De Maria
language: en
Publisher: John Wiley & Sons
Release Date: 2022-12-08
Systems Biology Modelling and Analysis Describes important modelling and computational methods for systems biology research to enable practitioners to select and use the most suitable technique Systems Biology Modelling and Analysis provides an overview of state-of-the-art techniques and introduces related tools and practices to formalize models and automate reasoning for systems biology. The authors present and compare the main formal methods used in systems biology for modelling biological networks, including discussion of their advantages, drawbacks, and main applications. Each chapter includes an intuitive presentation of the specific formalism, a brief history of the formalism and of its applications in systems biology, a formal description of the formalism and its variants, at least one realistic case study, some applications of formal techniques to validate and make deep analysis of models encoded with the formalism, and a discussion on the kind of biological systems for which the formalism is suited, along with concrete ideas on its possible evolution. Edited by a highly qualified expert with significant experience in the field, some of the methods and techniques covered in Systems Biology Modelling and Analysis include: Petri nets, an important tool for studying different aspects of biological systems, ranging from simple signaling pathways to metabolic networks and beyond Pathway Logic, a formal, rule-based system and interactive viewer for developing executable models of cellular processes Boolean networks, a mathematical model which has been widely used for decades in the context of biological regulation networks Answer Set Programming (ASP), which has proven to be a strong logic programming paradigm to deal with the inherent complexity of biological models For systems biologists, biochemists, bioinformaticians, molecular biologists, pharmacologists, and computer scientists, Systems Biology Modelling and Analysis is a comprehensive all-in-one resource to understand and harness the field’s current models and techniques while also preparing for their potential developments in coming years with the help of the author’s expert insight.