Biological Computation

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Biological Computation

The area of biologically inspired computing, or biological computation, involves the development of new, biologically based techniques for solving difficult computational problems. A unified overview of computer science ideas inspired by biology, Biological Computation presents the most fundamental and significant concepts in this area. In the book, students discover that bacteria communicate, that DNA can be used for performing computations, how evolution solves optimization problems, that the way ants organize their nests can be applied to solve clustering problems, and what the human immune system can teach us about protecting computer networks. The authors discuss more biological examples such as these, along with the computational techniques developed from these scenarios. The text focuses on cellular automata, evolutionary computation, neural networks, and molecular computation. Each chapter explores the biological background, describes the computational techniques, gives examples of applications, discusses possible variants of the techniques, and includes exercises and solutions. The authors use the examples and exercises to illustrate key ideas and techniques. Clearly conveying the essence of the major computational approaches in the field, this book brings students to the point where they can either produce a working implementation of the techniques or effectively use one of the many available implementations. Moreover, the techniques discussed reflect fundamental principles that can be applied beyond bio-inspired computing. Supplementary material is available on Dr. Unger's website.
Complex Fluids in Biological Systems

This book serves as an introduction to the continuum mechanics and mathematical modeling of complex fluids in living systems. The form and function of living systems are intimately tied to the nature of surrounding fluid environments, which commonly exhibit nonlinear and history dependent responses to forces and displacements. With ever-increasing capabilities in the visualization and manipulation of biological systems, research on the fundamental phenomena, models, measurements, and analysis of complex fluids has taken a number of exciting directions. In this book, many of the world’s foremost experts explore key topics such as: Macro- and micro-rheological techniques for measuring the material properties of complex biofluids and the subtleties of data interpretation Experimental observations and rheology of complex biological materials, including mucus, cell membranes, the cytoskeleton, and blood The motility of microorganisms in complex fluids and the dynamics of active suspensions Challenges and solutions in the numerical simulation of biologically relevant complex fluid flows This volume will be accessible to advanced undergraduate and beginning graduate students in engineering, mathematics, biology, and the physical sciences, but will appeal to anyone interested in the intricate and beautiful nature of complex fluids in the context of living systems.
Swarm Intelligence and Bio-Inspired Computation

Swarm Intelligence and bio-inspired computation have become increasing popular in the last two decades. Bio-inspired algorithms such as ant colony algorithms, bat algorithms, bee algorithms, firefly algorithms, cuckoo search and particle swarm optimization have been applied in almost every area of science and engineering with a dramatic increase of number of relevant publications. This book reviews the latest developments in swarm intelligence and bio-inspired computation from both the theory and application side, providing a complete resource that analyzes and discusses the latest and future trends in research directions. It can help new researchers to carry out timely research and inspire readers to develop new algorithms. With its impressive breadth and depth, this book will be useful for advanced undergraduate students, PhD students and lecturers in computer science, engineering and science as well as researchers and engineers. - Focuses on the introduction and analysis of key algorithms - Includes case studies for real-world applications - Contains a balance of theory and applications, so readers who are interested in either algorithm or applications will all benefit from this timely book.